dvipdfmx emits a lot of warnings and Koji suggests ps2pdf.
Thanks to Koji for the advice.
Note that on Debian, I installed the following packages
to be able to compile with ps2pdf:
fonts-takao-mincho
fonts-ipafont-nonfree-jisx0208
fonts-ipaexfont-mincho
\font_sf_scale 100
\font_tt_scale 100
\graphics default
-\default_output_format pdf3
+\default_output_format pdf
\output_sync 0
\bibtex_command default
\index_command default
\font_sf_scale 100
\font_tt_scale 100
\graphics default
-\default_output_format pdf3
+\default_output_format pdf
\output_sync 0
\bibtex_command default
\index_command default
\font_sf_scale 100
\font_tt_scale 100
\graphics default
-\default_output_format pdf3
+\default_output_format pdf
\output_sync 0
\bibtex_command default
\index_command default
\font_sf_scale 100
\font_tt_scale 100
\graphics default
-\default_output_format pdf3
+\default_output_format pdf
\output_sync 0
\bibtex_command default
\index_command default
\font_sf_scale 100
\font_tt_scale 100
\graphics default
-\default_output_format pdf3
+\default_output_format pdf
\output_sync 0
\bibtex_command default
\index_command default
\font_tt_scale 100
\graphics default
-\default_output_format pdf3
+\default_output_format pdf
\output_sync 0
\bibtex_command default
\index_command default
\font_sf_scale 100
\font_tt_scale 100
\graphics default
-\default_output_format pdf3
+\default_output_format pdf
\output_sync 0
\bibtex_command default
\index_command default
\font_sf_scale 100
\font_tt_scale 100
\graphics default
-\default_output_format pdf3
+\default_output_format pdf
\output_sync 0
\bibtex_command default
\index_command default
\font_sf_scale 100
\font_tt_scale 100
\graphics default
-\default_output_format pdf3
+\default_output_format pdf
\output_sync 0
\bibtex_command default
\index_command default
\font_sf_scale 100
\font_tt_scale 100
\graphics default
-\default_output_format pdf3
+\default_output_format pdf
\output_sync 0
\bibtex_command default
\index_command default
\font_sf_scale 100
\font_tt_scale 100
\graphics dvips
-\default_output_format pdf3
+\default_output_format pdf
\output_sync 0
\bibtex_command default
\index_command default
\font_sf_scale 100
\font_tt_scale 100
\graphics default
-\default_output_format pdf3
+\default_output_format pdf
\output_sync 0
\bibtex_command bibtex
\index_command default
\font_tt_scale 100
\graphics default
-\default_output_format pdf3
+\default_output_format pdf
\output_sync 0
\bibtex_command default
\index_command default
\font_tt_scale 100
\graphics default
-\default_output_format pdf3
+\default_output_format pdf
\output_sync 0
\bibtex_command default
\index_command default
\font_tt_scale 100
\graphics default
-\default_output_format pdf3
+\default_output_format pdf
\output_sync 0
\bibtex_command default
\index_command default
\font_tt_scale 100
\graphics default
-\default_output_format pdf3
+\default_output_format pdf
\output_sync 0
\bibtex_command default
\index_command default
\font_tt_scale 100
\graphics default
-\default_output_format pdf3
+\default_output_format pdf
\output_sync 0
\bibtex_command default
\index_command default